Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825297.1_cds_XP_016502270.1_15929
CDS Infomation

[gene=LOC107820495] [db_xref=GeneID:107820495] [protein=endoglucanase 24-like] [protein_id=XP_016502270.1] [location=complement(join(2911..3519,3660..3821,4615..4914,7565..7978))] [gbkey=CDS]
Sequence

ATGAAGAACAACATTTCTTCAAAATTCATGCTTCTTCTTCTTTTACTTTCAGTTGAAATA
ATCCATGGAAGCTACCACGACTACACAGACGCATTAACAAAATCCATTCTCTTTTTCGAA
GGCCAACGTTCTGGTTATTTGCCACAAGACCAGAGAATGAACTGGCGAGGACATTCCGGT
TTAGGCGACGGGTGGATGGTGAACACCGACTTGACCGGCGGCTACTACGACGCCGGCGAT
AATGTTAAGTTTAATTTTCCGATGGCATTTACCACTACATTGTTGGCTTGGAGTGTGATT
GAATTTGGGCAGTATATGCCTCCCTCTGAATTAAGGAATGCTTTAGTCGCTATCCGTTGG
TCCACTGATTATCTTCTCAAGACTGTCTCTCAACCCAATCGCATTTTTGTCCAGGTGGGT
GATCCAGTCCTGGACCATAACTGTTGGGAAAGGCCAGAAGATATGGACACTGCTAGGACA
GTATATACAGTGGATGCTCCGAATCCGGCATCCGATGTGGCCGGAGAGACTGCAGCTGCG
TTCGCAGCTGCATCCATTGCTTTCCGGTCGTCGGATCCCGGATATTCAGACACACTCTTG
AGAACATCCACTAGGGTGTTTGATTTTGCAGATAGGAACCGTGGAGCTTACAGTGACAAT
CTCAATATTAGAGATGGAGTTTGTCCGTATTATTGTGATTTTGATGGATATCAGGATGAG
TTATTGTGGGGAGCAGCGTGGCTGAGGAGGGCTACCCAGAGTGACATTTATATGAATTAC
ATACAAGAGAATCGTCAAACACTTGGGGCAGATGACAACATCAATGAATTTGGATGGGAC
AATAAGCACGCTGGCCTTAATGTTCTTGTTTCTAAGGAAGTCTTAGAAGGGAGCGTGTAT
TCGCTCCAATCGTACAAAGCATCAGCAGATAGTTTCATGTGCACATTAATCCCAGAATCA
TCATCTTCACATATAGAATACTCTCCTGGCGGCCTAATTTACAAACCAGGCGGAAGCAAT
TTACAACATGCTACAACCATCACATTTTTACTCCTCATCTACGCAAATTACTTAGAAAAA
TCATCACAAATCTTGAATTGTGGCACTATTAGTGTCAATCCAACGATGCTCCGAAAAATT
GGTAAGAGACAAGTTGATTACATTTTGGGAGATAATCCTAAAGGAATGTCTTATATGGTT
GGTTATAGTAATTACTATCCTTCAAAAATTCATCATCGTGGCTCGTCCCTACCATCGATT
AAAGATCATCCTCAGTTCATCGCGTGCAGAGAGGGCTCGATTTATTTTAACTCATCACAC
CCAAATCCTAATGTTTTAGTTGGTGCAATTGTTGGTGGTCCTGGAGAAGATGATGTTTAT
GATGATAGTAGGGATGATTTTCGTAAATCTGAGCCAACTACTTATATTAATGCACCATTT
GTAGGTGCACTTGCTTATTTTGCTGCTAATCCTAACATTAGTTAA

Peptide Sequence

PEP ID

XP_016502270.1
PEP Infomation

PREDICTED: endoglucanase 24-like [Nicotiana tabacum]
Sequence

MKNNISSKFMLLLLLLSVEIIHGSYHDYTDALTKSILFFEGQRSGYLPQDQRMNWRGHSG
LGDGWMVNTDLTGGYYDAGDNVKFNFPMAFTTTLLAWSVIEFGQYMPPSELRNALVAIRW
STDYLLKTVSQPNRIFVQVGDPVLDHNCWERPEDMDTARTVYTVDAPNPASDVAGETAAA
FAAASIAFRSSDPGYSDTLLRTSTRVFDFADRNRGAYSDNLNIRDGVCPYYCDFDGYQDE
LLWGAAWLRRATQSDIYMNYIQENRQTLGADDNINEFGWDNKHAGLNVLVSKEVLEGSVY
SLQSYKASADSFMCTLIPESSSSHIEYSPGGLIYKPGGSNLQHATTITFLLLIYANYLEK
SSQILNCGTISVNPTMLRKIGKRQVDYILGDNPKGMSYMVGYSNYYPSKIHHRGSSLPSI
KDHPQFIACREGSIYFNSSHPNPNVLVGAIVGGPGEDDVYDDSRDDFRKSEPTTYINAPF
VGALAYFAANPNIS

Transcript Sequence

Gene sequence data has not been registered.